BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H10SP1|AL427402
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig533 1723 0.0
>3x_Contig533
Length = 2268
Score = 1723 bits (860), Expect = 0.0
Identities = 918/944 (97%), Gaps = 3/944 (0%)
Strand = Plus / Plus
Query: 1 cctgctcttctgtttcatatttaawggtaaccttgaaatttgaagcagttacagaraatg 60
||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 534 cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 593
Query: 61 ttaatwacaaatattgcgttcacatacaaactgttactcaaacaaagagagttcaattgg 120
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 594 ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 653
Query: 121 wacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 713
Query: 181 cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 773
Query: 241 gttcattaccatcaatattccagactgttcgawccctaadatggaattwaccgadaattc 300
|||||||||||||||||||||||||||| ||| |||||| |||||||| ||||| |||||
Sbjct: 774 gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 833
Query: 301 tttggaattcagtgcactatctaagtttcacagttaagatgggatcnaataccatttgcw 360
|||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 834 tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 893
Query: 361 cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 953
Query: 421 awactactttttggtgttaaggaagahagatttaggccttgaatactggcccagattgac 480
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 954 aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 1013
Query: 481 caaggagaagcttaagtttcattacattwwnwccgactttgataaatgggttgacgaaga 540
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 1014 caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 1073
Query: 541 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 1133
Query: 601 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccgg 1193
Query: 661 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaaaaagctga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaaaaagctga 1253
Query: 721 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttg 1313
Query: 781 ctgtatacagtcatgcgcatatataggtgtataaatacgaacaaaaatttctattatata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 ctgtatacagtcatgcgcatatataggtgtataaatacgaacaaaaatttctattatata 1373
Query: 841 ttatg-atattgagcggctttgaataaaaagctatttagaccttttggaacttcaattca 899
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 ttatgcatattgagcggctttgaataaaaagctatttagaccttttggaacttcaattca 1433
Query: 900 tctttatac-aaatctgggaggcaa-ccagttttcgcytggtgc 941
||||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 1434 tctttatacaaaatctgggaggcaacccagttttcgcctggtgc 1477
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7963
Number of Sequences: 1807
Number of extensions: 7963
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)